Vcorn
SARS-CoV-2
Database of viral gene mutation
★ A989V
♦
Profile
Specimens
cDNA
3-letter
amino acid
1-letter
amino acid
The earliest specimen
Specimen ID
Collectin date
Geographical location
1
c.2966C>T
Ala989Val
A989V
OL640882.1
2020-06-07
United States
OL640882.1
159
United States
♦
WHO labeled variants
WHO label
Designation
Pango lineage
Specimen Share
♦
Network between major mutations
D614G:4506044
T478K:2553534
P681R:2355409
L452R:2349970
T19R:2322794
D950N:2281695
E156fs:2195342
T95I:1965853
G142D:1782677
P681H:1694756
I68fs:1339550
H655Y:1152729
D1146D:1129097
N969K:1127426
N679K:1122229
Q954H:1120456
D796Y:1119646
N764K:997811
L981F:974312
N856K:971667
G142fs:929297
N211fs:894950
D215fs:856919
A67V:821327
N501Y:803058
D1118H:536277
A570D:535974
T716I:534999
V143fs:533547
S982A:530469
A222V:291211
S477N:275862
G339D:255747
E484A:241310
Q493R:240554
Q498R:239210
Y505H:237388
S373P:232744
S371F:231792
S375F:231769
I882I:229103
N440K:223515
V11V:222600
K417N:199576
I68fs:158443
A67fs:158376
H69fs:157730
T19I:152454
V213G:150560
L24fs:149962
R408S:146478
D405N:143596
T376A:142954
A701V:132054
T547K:120884
Y145H:105241
L5F:97350
D1259D:96620
D574D:94892
G496S:91242
S371P:88455
G446S:81179
L18F:74798
R346K:74028
E484K:67387
S112L:60718
I410I:52931
A989V:1
D614G
(gray);
alpha
(purple);
beta
(cyan);
gamma
(green);
delta
(orange);
omicron
(red);
related to alpha
(lavender);
related to beta
(lightcyan);
related to delta
(moccasin);
others
(darkgray)
Black dot
: mutation of interest;
mutation in red or gray characters
: coexistent in ≥50% or <50% specimens
Link color
Black: 1 Maroon: ≥0.75 Red: ≥0.5 Orange: ≥0.25 Yellow: ≥0
♦
Monthly chart
2020
Jan.
Feb.
Mar.
Apr.
May
Jun.
Jul.
Aug.
Sep.
Oct.
Nov.
Dec.
2021
Jan.
Feb.
Mar.
Apr.
May
Jun.
Jul.
Aug.
Sep.
Oct.
Nov.
Dec.
0
10
20
30
40
50
60
70
80
90
100
Mutation ratio (%)
Jan 2020, 0 (0%)
Feb 2020, 0 (0%)
Mar 2020, 0 (0%)
Apr 2020, 0 (0%)
May 2020, 0 (0%)
Jun 2020, 1 (0%)
Jul 2020, 0 (0%)
Aug 2020, 0 (0%)
Sep 2020, 0 (0%)
Oct 2020, 0 (0%)
Nov 2020, 0 (0%)
Dec 2020, 0 (0%)
Jan 2021, 0 (0%)
Feb 2021, 0 (0%)
Mar 2021, 0 (0%)
Apr 2021, 0 (0%)
May 2021, 0 (0%)
Jun 2021, 0 (0%)
Jul 2021, 0 (0%)
Aug 2021, 0 (0%)
Sep 2021, 0 (0%)
Oct 2021, 0 (0%)
Nov 2021, 0 (0%)
Dec 2021, 0 (0%)
♦
Global map
/* * Ocean & lake */
/* * Each country/territory/region *//* * id="af", Afghanistan */
Afghanistan: 0 (0%)
/* * id="al", Albania */
Albania: 0 (0%)
/* * id="dz", Algeria */
Algeria: 0 (0%)
/* * id="as", American Samoa (US) */
American Samoa (US): 0 (0%)
/* * id="ad", Andorra */
Andorra: 0 (0%)
/* * id="ao", Angola */
Angola: 0 (0%)
/* * id="ai", Anguilla (UK) */
Anguilla (UK): 0 (0%)
/* * id="aq", Antarctica */
Antarctica: 0 (0%)
/* * id="ag", Antigua and Barbuda */
Antigua and Barbuda: 0 (0%)
/* * id="ar", Argentina */
Argentina: 0 (0%)
/* * id="am", Armenia */
Armenia: 0 (0%)
/* * id="aw", Aruba (Netherlands) */
Aruba (Netherlands): 0 (0%)
/* * id="au", Australia */
Australia: 0 (0%)
/* * id="at", Austria */
Austria: 0 (0%)
/* * id="az", Azerbaijan */
Azerbaijan: 0 (0%)
/* * id="bs", Bahamas */
Bahamas: 0 (0%)
/* * id="bh", Bahrain */
Bahrain: 0 (0%)
/* * id="bd", Bangladesh */
Bangladesh: 0 (0%)
/* * id="bb", Barbados */
Barbados: 0 (0%)
/* * id="by", Belarus */
Belarus: 0 (0%)
/* * id="be", Belgium */
Belgium: 0 (0%)
/* * id="bz", Belize */
Belize: 0 (0%)
/* * id="bj", Benin */
Benin: 0 (0%)
/* * id="bm", Bermuda (UK) */
Bermuda (UK): 0 (0%)
/* * id="bt", Bhutan */
Bhutan: 0 (0%)
/* * id="bo", Bolivia */
Bolivia: 0 (0%)
/* * id="ba", Bosnia and Herzegovina */
Bosnia and Herzegovina: 0 (0%)
/* * id="bw", Botswana */
Botswana: 0 (0%)
/* * id="br", Brazil */
Brazil: 0 (0%)
/* * id="bn", Brunei */
Brunei: 0 (0%)
/* * id="bg", Bulgaria */
Bulgaria: 0 (0%)
/* * id="bf", Burkina Faso */
Burkina Faso: 0 (0%)
/* * id="bi", Burundi */
Burundi: 0 (0%)
/* * id="cv", Cape Verde */
Cape Verde: 0 (0%)
/* * id="kh", Cambodia */
Cambodia: 0 (0%)
/* * id="cm", Cameroon */
Cameroon: 0 (0%)
/* * id="ca", Canada */
Canada: 0 (0%)
/* * id="ky", Cayman Islands (UK) */
Cayman Islands (UK): 0 (0%)
/* * id="cf", Central African Republic */
Central African Republic: 0 (0%)
/* * id="td", Chad */
Chad: 0 (0%)
/* * id="cl", Chile */
Chile: 0 (0%)
/* * id="cn", China */
China: 0 (0%)
/* * id="co", Colombia */
Colombia: 0 (0%)
/* * id="km", Comoros */
Comoros: 0 (0%)
/* * id="cg", Congo */
Congo: 0 (0%)
/* * id="cd", DR Congo */
DR Congo: 0 (0%)
/* * id="ck", Cook Islands (NZ) */
Cook Islands (NZ): 0 (0%)
/* * id="cr", Costa Rica */
Costa Rica: 0 (0%)
/* * id="ci", Ivory Coast */
Ivory Coast: 0 (0%)
/* * id="hr", Croatia */
Croatia: 0 (0%)
/* * id="cu", Cuba */
Cuba: 0 (0%)
/* * id="cy", Cyprus */
Cyprus: 0 (0%)
/* * id="cz", Czech Republic */
Czech Republic: 0 (0%)
/* * id="dk", Denmark */
Denmark: 0 (0%)
/* * id="dj", Djibouti */
Djibouti: 0 (0%)
/* * id="dm", Dominica */
Dominica: 0 (0%)
/* * id="do", Dominican Republic */
Dominican Republic: 0 (0%)
/* * id="ec", Ecuador */
Ecuador: 0 (0%)
/* * id="eg", Egypt */
Egypt: 0 (0%)
/* * id="sv", El Salvador */
El Salvador: 0 (0%)
/* * id="gq", Equatorial Guinea */
Equatorial Guinea: 0 (0%)
/* * id="er", Eritrea */
Eritrea: 0 (0%)
/* * id="ee", Estonia */
Estonia: 0 (0%)
/* * id="sz", Eswatini */
Eswatini: 0 (0%)
/* * id="et", Ethiopia */
Ethiopia: 0 (0%)
/* * id="fk", Falkland Islands (UK) */
Falkland Islands (UK): 0 (0%)
/* * id="fo", Faroe Islands (Denmark) */
Faroe Islands (Denmark): 0 (0%)
/* * id="fj", Fiji */
Fiji: 0 (0%)
/* * id="fi", Finland */
Finland: 0 (0%)
/* * id="fr", France */
France: 0 (0%)
/* * id="pf", French Polynesia (France) */
French Polynesia (France): 0 (0%)
/* * id="ga", Gabon */
Gabon: 0 (0%)
/* * id="gm", Gambia */
Gambia: 0 (0%)
/* * id="ge", Georgia */
Georgia: 0 (0%)
/* * id="de", Germany */
Germany: 0 (0%)
/* * id="gh", Ghana */
Ghana: 0 (0%)
/* * id="gi", Gibraltar (UK) */
Gibraltar (UK): 0 (0%)
/* * id="gr", Greece */
Greece: 0 (0%)
/* * id="gl", Greenland (Denmark) */
Greenland (Denmark): 0 (0%)
/* * id="gd", Grenada */
Grenada: 0 (0%)
/* * id="gu", Guam (US) */
Guam (US): 0 (0%)
/* * id="gt", Guatemala */
Guatemala: 0 (0%)
/* * id="gg", Guernsey (UK) */
Guernsey (UK): 0 (0%)
/* * id="gn", Guinea */
Guinea: 0 (0%)
/* * id="gw", Guinea-Bissau */
Guinea-Bissau: 0 (0%)
/* * id="gy", Guyana */
Guyana: 0 (0%)
/* * id="ht", Haiti */
Haiti: 0 (0%)
/* * id="va", Vatican City */
Vatican City: 0 (0%)
/* * id="hn", Honduras */
Honduras: 0 (0%)
/* * id="hu", Hungary */
Hungary: 0 (0%)
/* * id="is", Iceland */
Iceland: 0 (0%)
/* * id="in", India */
India: 0 (0%)
/* * id="id", Indonesia */
Indonesia: 0 (0%)
/* * id="ir", Iran */
Iran: 0 (0%)
/* * id="iq", Iraq */
Iraq: 0 (0%)
/* * id="ie", Ireland */
Ireland: 0 (0%)
/* * id="im", Isle of Man (UK) */
Isle of Man (UK): 0 (0%)
/* * id="il", Israel */
Israel: 0 (0%)
/* * id="it", Italy */
Italy: 0 (0%)
/* * id="jm", Jamaica */
Jamaica: 0 (0%)
/* * id="jp", Japan */
Japan: 0 (0%)
/* * id="je", Jersey (UK) */
Jersey (UK): 0 (0%)
/* * id="jo", Jordan */
Jordan: 0 (0%)
/* * id="kz", Kazakhstan */
Kazakhstan: 0 (0%)
/* * id="ke", Kenya */
Kenya: 0 (0%)
/* * id="ki", Kiribati */
Kiribati: 0 (0%)
/* * id="kp", North Korea */
North Korea: 0 (0%)
/* * id="kr", South Korea */
South Korea: 0 (0%)
/* * id="kw", Kuwait */
Kuwait: 0 (0%)
/* * id="kg", Kyrgyzstan */
Kyrgyzstan: 0 (0%)
/* * id="la", Laos */
Laos: 0 (0%)
/* * id="lv", Latvia */
Latvia: 0 (0%)
/* * id="lb", Lebanon */
Lebanon: 0 (0%)
/* * id="ls", Lesotho */
Lesotho: 0 (0%)
/* * id="lr", Liberia */
Liberia: 0 (0%)
/* * id="ly", Libya */
Libya: 0 (0%)
/* * id="li", Liechtenstein */
Liechtenstein: 0 (0%)
/* * id="lt", Lithuania */
Lithuania: 0 (0%)
/* * id="lu", Luxembourg */
Luxembourg: 0 (0%)
/* * id="mg", Madagascar */
Madagascar: 0 (0%)
/* * id="mw", Malawi */
Malawi: 0 (0%)
/* * id="my", Malaysia */
Malaysia: 0 (0%)
/* * id="mv", Maldives */
Maldives: 0 (0%)
/* * id="ml", Mali */
Mali: 0 (0%)
/* * id="mt", Malta */
Malta: 0 (0%)
/* * id="mh", Marshall Islands */
Marshall Islands: 0 (0%)
/* * id="mr", Mauritania */
Mauritania: 0 (0%)
/* * id="mu", Mauritius */
Mauritius: 0 (0%)
/* * id="yt", Mayotte */
Mayotte: 0 (0%)
/* * id="mx", Mexico */
Mexico: 0 (0%)
/* * id="fm", F.S. Micronesia */
F.S. Micronesia: 0 (0%)
/* * id="md", Moldova */
Moldova: 0 (0%)
/* * id="mc", Monaco */
Monaco: 0 (0%)
/* * id="mn", Mongolia */
Mongolia: 0 (0%)
/* * id="me", Montenegro */
Montenegro: 0 (0%)
/* * id="ms", Montserrat (UK) */
Montserrat (UK): 0 (0%)
/* * id="ma", Morocco */
Morocco: 0 (0%)
/* * id="mz", Mozambique */
Mozambique: 0 (0%)
/* * id="mm", Myanmar */
Myanmar: 0 (0%)
/* * id="na", Namibia */
Namibia: 0 (0%)
/* * id="nr", Nauru */
Nauru: 0 (0%)
/* * id="np", Nepal */
Nepal: 0 (0%)
/* * id="nl", Netherlands */
Netherlands: 0 (0%)
/* * id="nc", New Caledonia (France) */
New Caledonia (France): 0 (0%)
/* * id="nz", New Zealand */
New Zealand: 0 (0%)
/* * id="ni", Nicaragua */
Nicaragua: 0 (0%)
/* * id="ne", Niger */
Niger: 0 (0%)
/* * id="ng", Nigeria */
Nigeria: 0 (0%)
/* * id="nu", Niue (NZ) */
Niue (NZ): 0 (0%)
/* * id="mk", North Macedonia */
North Macedonia: 0 (0%)
/* * id="mp", Northern Mariana Islands (US) */
Northern Mariana Islands (US): 0 (0%)
/* * id="no", Norway */
Norway: 0 (0%)
/* * id="om", Oman */
Oman: 0 (0%)
/* * id="pk", Pakistan */
Pakistan: 0 (0%)
/* * id="pw", Palau */
Palau: 0 (0%)
/* * id="ps", Palestine */
Palestine: 0 (0%)
/* * id="pa", Panama */
Panama: 0 (0%)
/* * id="pg", Papua New Guinea */
Papua New Guinea: 0 (0%)
/* * id="py", Paraguay */
Paraguay: 0 (0%)
/* * id="pe", Peru */
Peru: 0 (0%)
/* * id="ph", Philippines */
Philippines: 0 (0%)
/* * id="pn", Pitcairn Islands (UK) */
Pitcairn Islands (UK): 0 (0%)
/* * id="pl", Poland */
Poland: 0 (0%)
/* * id="pt", Portugal */
Portugal: 0 (0%)
/* * id="pr", Puerto Rico (US) */
Puerto Rico (US): 0 (0%)
/* * id="qa", Qatar */
Qatar: 0 (0%)
/* * id="ro", Romania */
Romania: 0 (0%)
/* * id="ru", Russia */
Russia: 0 (0%)
/* * id="rw", Rwanda */
Rwanda: 0 (0%)
/* * id="bl", Saint Barthelemy (France) */
Saint Barthelemy (France): 0 (0%)
/* * id="sh", Saint Helena, Ascension and Tristan da Cunha (UK) */
Saint Helena, Ascension and Tristan da Cunha (UK): 0 (0%)
/* * id="kn", Saint Kitts and Nevis */
Saint Kitts and Nevis: 0 (0%)
/* * id="lc", Saint Lucia */
Saint Lucia: 0 (0%)
/* * id="mf", Saint Martin (France) */
Saint Martin (France): 0 (0%)
/* * id="pm", Saint Pierre and Miquelon (France) */
Saint Pierre and Miquelon (France): 0 (0%)
/* * id="vc", Saint Vincent and the Grenadines */
Saint Vincent and the Grenadines: 0 (0%)
/* * id="ws", Samoa */
Samoa: 0 (0%)
/* * id="sm", San Marino */
San Marino: 0 (0%)
/* * id="st", Sao Tome and Principe */
Sao Tome and Principe: 0 (0%)
/* * id="sa", Saudi Arabia */
Saudi Arabia: 0 (0%)
/* * id="sn", Senegal */
Senegal: 0 (0%)
/* * id="rs", Serbia */
Serbia: 0 (0%)
/* * id="sc", Seychelles */
Seychelles: 0 (0%)
/* * id="sl", Sierra Leone */
Sierra Leone: 0 (0%)
/* * id="sg", Singapore */
Singapore: 0 (0%)
/* * id="sk", Slovakia */
Slovakia: 0 (0%)
/* * id="si", Slovenia */
Slovenia: 0 (0%)
/* * id="sb", Solomon Islands */
Solomon Islands: 0 (0%)
/* * id="so", Somalia */
Somalia: 0 (0%)
/* * id="za", South Africa */
South Africa: 0 (0%)
/* * id="ss", South Sudan */
South Sudan: 0 (0%)
/* * id="es", Spain */
Spain: 0 (0%)
/* * id="lk", Sri Lanka */
Sri Lanka: 0 (0%)
/* * id="sd", Sudan */
Sudan: 0 (0%)
/* * id="sr", Suriname */
Suriname: 0 (0%)
/* * id="se", Sweden */
Sweden: 0 (0%)
/* * id="ch", Switzerland */
Switzerland: 0 (0%)
/* * id="sy", Syria */
Syria: 0 (0%)
/* * id="tw", Taiwan */
Taiwan: 0 (0%)
/* * id="tj", Tajikistan */
Tajikistan: 0 (0%)
/* * id="tz", Tanzania */
Tanzania: 0 (0%)
/* * id="th", Thailand */
Thailand: 0 (0%)
/* * id="tl", East Timor */
East Timor: 0 (0%)
/* * id="tg", Togo */
Togo: 0 (0%)
/* * id="to", Tonga */
Tonga: 0 (0%)
/* * id="tt", Trinidad and Tobago */
Trinidad and Tobago: 0 (0%)
/* * id="tn", Tunisia */
Tunisia: 0 (0%)
/* * id="tr", Turkey */
Turkey: 0 (0%)
/* * id="tm", Turkmenistan */
Turkmenistan: 0 (0%)
/* * id="tc", Turks and Caicos Islands (UK) */
Turks and Caicos Islands (UK): 0 (0%)
/* * id="tv", Tuvalu */
Tuvalu: 0 (0%)
/* * id="ug", Uganda */
Uganda: 0 (0%)
/* * id="ua", Ukraine */
Ukraine: 0 (0%)
/* * id="ae", United Arab Emirates */
United Arab Emirates: 0 (0%)
/* * id="gb", United Kingdom */
United Kingdom: 0 (0%)
/* * id="us", United States */
United States: 1 (0%)
/* * id="uy", Uruguay */
Uruguay: 0 (0%)
/* * id="uz", Uzbekistan */
Uzbekistan: 0 (0%)
/* * id="vu", Vanuatu */
Vanuatu: 0 (0%)
/* * id="ve", Venezuela */
Venezuela: 0 (0%)
/* * id="vn", Vietnam */
Vietnam: 0 (0%)
/* * id="vg", British Virgin Islands (UK) */
British Virgin Islands (UK): 0 (0%)
/* * id="vi", U.S. Virgin Islands (US) */
U.S. Virgin Islands (US): 0 (0%)
/* * id="wf", Wallis and Futuna (France) */
Wallis and Futuna (France): 0 (0%)
/* * id="eh", Western Sahara */
Western Sahara: 0 (0%)
/* * id="ye", Yemen */
Yemen: 0 (0%)
/* * id="zm", Zambia */
Zambia: 0 (0%)
/* * id="zw", Zimbabwe */
Zimbabwe: 0 (0%)
Gray
: unsampled;
White
: <100 specimens;
Yellow
: <25%;
Orange
: <:50%;
Red
: <75%;
Maroon
: <100%;
Black
: 100%
The KAGIANA Project
(since 2006)
Copyright (C) 2017-2021 All rights reserved Ogata Lab. & Osaka Prefecture University
