Vcorn
SARS-CoV-2
Database of viral gene mutation
★ N501Y
♦
Profile
Specimens
cDNA
3-letter
amino acid
1-letter
amino acid
The earliest specimen
Specimen ID
Collectin date
Geographical location
552,150
c.1501A>T
Asn501Tyr
N501Y
OK244698.1
2020-01-14
United States
OU809184.1
2020-11-06
United Kingdom
♦
WHO labeled variants
WHO label
Designation
Pango lineage
Specimen Share
Alpha
VOC
B.1.1.7
Beta
VOC
B.1.351
Gamma
VOC
P.1
Theta
Unmonitored
P.3
Mu
VOI
B.1.621
n/a
VUM
C.1.2
n/a
VUM
B.1.640
Omicron
VOC
BA.1
Omicron
VOC
BA.2
♦
Network between major mutations
D614G:4506044
T478K:2553534
P681R:2355409
L452R:2349970
T19R:2322794
D950N:2281695
E156fs:2195342
T95I:1965853
G142D:1782677
P681H:1694756
I68fs:1339550
H655Y:1152729
D1146D:1129097
N969K:1127426
N679K:1122229
Q954H:1120456
D796Y:1119646
N764K:997811
L981F:974312
N856K:971667
G142fs:929297
N211fs:894950
D215fs:856919
A67V:821327
N501Y:803058
D1118H:536277
A570D:535974
T716I:534999
V143fs:533547
S982A:530469
A222V:291211
S477N:275862
G339D:255747
E484A:241310
Q493R:240554
Q498R:239210
Y505H:237388
S373P:232744
S371F:231792
S375F:231769
I882I:229103
N440K:223515
V11V:222600
K417N:199576
I68fs:158443
A67fs:158376
H69fs:157730
T19I:152454
V213G:150560
L24fs:149962
R408S:146478
D405N:143596
T376A:142954
A701V:132054
T547K:120884
Y145H:105241
L5F:97350
D1259D:96620
D574D:94892
G496S:91242
S371P:88455
G446S:81179
L18F:74798
R346K:74028
E484K:67387
S112L:60718
I410I:52931
D614G
(gray);
alpha
(purple);
beta
(cyan);
gamma
(green);
delta
(orange);
omicron
(red);
related to alpha
(lavender);
related to beta
(lightcyan);
related to delta
(moccasin);
others
(darkgray)
Black dot
: mutation of interest;
mutation in red or gray characters
: coexistent in ≥50% or <50% specimens
♦
Coexistence
D614G
P681H
A570D
D1118H
T716I
S982A
V143fs
I68fs
H655Y
K1191N
E484K
L18F
T95I
L5F
T478K
S477N
A701V
D950N
P681R
A222V
N856N
L452R
V1264L
D1259D
G142D
T19R
E156fs
G413G
Y145H
D253G
S13I
S112L
V1122V
I882I
D574D
W152C
Maroon
mutated;
Orange
unclear about mutation;
Yellow
not mutated;
♦
Monthly chart
2020
Jan.
Feb.
Mar.
Apr.
May
Jun.
Jul.
Aug.
Sep.
Oct.
Nov.
Dec.
2021
Jan.
Feb.
Mar.
Apr.
May
Jun.
Jul.
Aug.
Sep.
Oct.
Nov.
Dec.
0
10
20
30
40
50
60
70
80
90
100
Mutation ratio (%)
Jan 2020, 1 (0%)
Feb 2020, 0 (0%)
Mar 2020, 4 (0%)
Apr 2020, 6 (0%)
May 2020, 12 (0%)
Jun 2020, 33 (0%)
Jul 2020, 10 (0%)
Aug 2020, 3 (0%)
Sep 2020, 6 (0%)
Oct 2020, 92 (0%)
Nov 2020, 1712 (4%)
Dec 2020, 12797 (25%)
Jan 2021, 46944 (46%)
Feb 2021, 60063 (52%)
Mar 2021, 133837 (67%)
Apr 2021, 155562 (78%)
May 2021, 89822 (67%)
Jun 2021, 28145 (22%)
Jul 2021, 9523 (3%)
Aug 2021, 2018 (0%)
Sep 2021, 251 (0%)
Oct 2021, 169 (0%)
Nov 2021, 158 (0%)
Dec 2021, 7828 (7%)
♦
Global map
/* * Ocean & lake */
/* * Each country/territory/region *//* * id="af", Afghanistan */
Afghanistan: 0 (0%)
/* * id="al", Albania */
Albania: 0 (0%)
/* * id="dz", Algeria */
Algeria: 0 (0%)
/* * id="as", American Samoa (US) */
American Samoa (US): 0 (0%)
/* * id="ad", Andorra */
Andorra: 0 (0%)
/* * id="ao", Angola */
Angola: 0 (0%)
/* * id="ai", Anguilla (UK) */
Anguilla (UK): 0 (0%)
/* * id="aq", Antarctica */
Antarctica: 0 (0%)
/* * id="ag", Antigua and Barbuda */
Antigua and Barbuda: 0 (0%)
/* * id="ar", Argentina */
Argentina: 0 (0%)
/* * id="am", Armenia */
Armenia: 1 (0%)
/* * id="aw", Aruba (Netherlands) */
Aruba (Netherlands): 0 (0%)
/* * id="au", Australia */
Australia: 36 (0%)
/* * id="at", Austria */
Austria: 121 (45%)
/* * id="az", Azerbaijan */
Azerbaijan: 0 (0%)
/* * id="bs", Bahamas */
Bahamas: 0 (0%)
/* * id="bh", Bahrain */
Bahrain: 114 (2%)
/* * id="bd", Bangladesh */
Bangladesh: 90 (8%)
/* * id="bb", Barbados */
Barbados: 0 (0%)
/* * id="by", Belarus */
Belarus: 1 (0%)
/* * id="be", Belgium */
Belgium: 0 (0%)
/* * id="bz", Belize */
Belize: 0 (0%)
/* * id="bj", Benin */
Benin: 0 (0%)
/* * id="bm", Bermuda (UK) */
Bermuda (UK): 0 (0%)
/* * id="bt", Bhutan */
Bhutan: 0 (0%)
/* * id="bo", Bolivia */
Bolivia: 0 (0%)
/* * id="ba", Bosnia and Herzegovina */
Bosnia and Herzegovina: 0 (0%)
/* * id="bw", Botswana */
Botswana: 0 (0%)
/* * id="br", Brazil */
Brazil: 595 (53%)
/* * id="bn", Brunei */
Brunei: 0 (0%)
/* * id="bg", Bulgaria */
Bulgaria: 0 (0%)
/* * id="bf", Burkina Faso */
Burkina Faso: 0 (0%)
/* * id="bi", Burundi */
Burundi: 0 (0%)
/* * id="cv", Cape Verde */
Cape Verde: 0 (0%)
/* * id="kh", Cambodia */
Cambodia: 1 (0%)
/* * id="cm", Cameroon */
Cameroon: 0 (0%)
/* * id="ca", Canada */
Canada: 0 (0%)
/* * id="ky", Cayman Islands (UK) */
Cayman Islands (UK): 0 (0%)
/* * id="cf", Central African Republic */
Central African Republic: 0 (0%)
/* * id="td", Chad */
Chad: 0 (0%)
/* * id="cl", Chile */
Chile: 0 (0%)
/* * id="cn", China */
China: 34 (7%)
/* * id="co", Colombia */
Colombia: 2 (0%)
/* * id="km", Comoros */
Comoros: 0 (0%)
/* * id="cg", Congo */
Congo: 0 (0%)
/* * id="cd", DR Congo */
DR Congo: 0 (0%)
/* * id="ck", Cook Islands (NZ) */
Cook Islands (NZ): 0 (0%)
/* * id="cr", Costa Rica */
Costa Rica: 0 (0%)
/* * id="ci", Ivory Coast */
Ivory Coast: 0 (0%)
/* * id="hr", Croatia */
Croatia: 0 (0%)
/* * id="cu", Cuba */
Cuba: 0 (0%)
/* * id="cy", Cyprus */
Cyprus: 0 (0%)
/* * id="cz", Czech Republic */
Czech Republic: 5 (0%)
/* * id="dk", Denmark */
Denmark: 1 (0%)
/* * id="dj", Djibouti */
Djibouti: 164 (46%)
/* * id="dm", Dominica */
Dominica: 0 (0%)
/* * id="do", Dominican Republic */
Dominican Republic: 1 (0%)
/* * id="ec", Ecuador */
Ecuador: 0 (0%)
/* * id="eg", Egypt */
Egypt: 24 (2%)
/* * id="sv", El Salvador */
El Salvador: 0 (0%)
/* * id="gq", Equatorial Guinea */
Equatorial Guinea: 0 (0%)
/* * id="er", Eritrea */
Eritrea: 0 (0%)
/* * id="ee", Estonia */
Estonia: 921 (54%)
/* * id="sz", Eswatini */
Eswatini: 0 (0%)
/* * id="et", Ethiopia */
Ethiopia: 8 (0%)
/* * id="fk", Falkland Islands (UK) */
Falkland Islands (UK): 0 (0%)
/* * id="fo", Faroe Islands (Denmark) */
Faroe Islands (Denmark): 0 (0%)
/* * id="fj", Fiji */
Fiji: 0 (0%)
/* * id="fi", Finland */
Finland: 5 (0%)
/* * id="fr", France */
France: 623 (36%)
/* * id="pf", French Polynesia (France) */
French Polynesia (France): 0 (0%)
/* * id="ga", Gabon */
Gabon: 0 (0%)
/* * id="gm", Gambia */
Gambia: 0 (0%)
/* * id="ge", Georgia */
Georgia: 0 (0%)
/* * id="de", Germany */
Germany: 95,944 (45%)
/* * id="gh", Ghana */
Ghana: 148 (49%)
/* * id="gi", Gibraltar (UK) */
Gibraltar (UK): 0 (0%)
/* * id="gr", Greece */
Greece: 0 (0%)
/* * id="gl", Greenland (Denmark) */
Greenland (Denmark): 0 (0%)
/* * id="gd", Grenada */
Grenada: 0 (0%)
/* * id="gu", Guam (US) */
Guam (US): 0 (0%)
/* * id="gt", Guatemala */
Guatemala: 0 (0%)
/* * id="gg", Guernsey (UK) */
Guernsey (UK): 0 (0%)
/* * id="gn", Guinea */
Guinea: 7 (0%)
/* * id="gw", Guinea-Bissau */
Guinea-Bissau: 0 (0%)
/* * id="gy", Guyana */
Guyana: 0 (0%)
/* * id="ht", Haiti */
Haiti: 0 (0%)
/* * id="va", Vatican City */
Vatican City: 0 (0%)
/* * id="hn", Honduras */
Honduras: 0 (0%)
/* * id="hu", Hungary */
Hungary: 20 (0%)
/* * id="is", Iceland */
Iceland: 23 (0%)
/* * id="in", India */
India: 112 (4%)
/* * id="id", Indonesia */
Indonesia: 0 (0%)
/* * id="ir", Iran */
Iran: 13 (3%)
/* * id="iq", Iraq */
Iraq: 45 (15%)
/* * id="ie", Ireland */
Ireland: 0 (0%)
/* * id="im", Isle of Man (UK) */
Isle of Man (UK): 0 (0%)
/* * id="il", Israel */
Israel: 0 (0%)
/* * id="it", Italy */
Italy: 29 (8%)
/* * id="jm", Jamaica */
Jamaica: 0 (0%)
/* * id="jp", Japan */
Japan: 234 (22%)
/* * id="je", Jersey (UK) */
Jersey (UK): 0 (0%)
/* * id="jo", Jordan */
Jordan: 0 (0%)
/* * id="kz", Kazakhstan */
Kazakhstan: 5 (0%)
/* * id="ke", Kenya */
Kenya: 856 (23%)
/* * id="ki", Kiribati */
Kiribati: 0 (0%)
/* * id="kp", North Korea */
North Korea: 0 (0%)
/* * id="kr", South Korea */
South Korea: 0 (0%)
/* * id="kw", Kuwait */
Kuwait: 0 (0%)
/* * id="kg", Kyrgyzstan */
Kyrgyzstan: 0 (0%)
/* * id="la", Laos */
Laos: 0 (0%)
/* * id="lv", Latvia */
Latvia: 0 (0%)
/* * id="lb", Lebanon */
Lebanon: 509 (54%)
/* * id="ls", Lesotho */
Lesotho: 0 (0%)
/* * id="lr", Liberia */
Liberia: 0 (0%)
/* * id="ly", Libya */
Libya: 3 (0%)
/* * id="li", Liechtenstein */
Liechtenstein: 16 (6%)
/* * id="lt", Lithuania */
Lithuania: 0 (0%)
/* * id="lu", Luxembourg */
Luxembourg: 0 (0%)
/* * id="mg", Madagascar */
Madagascar: 0 (0%)
/* * id="mw", Malawi */
Malawi: 39 (16%)
/* * id="my", Malaysia */
Malaysia: 23 (15%)
/* * id="mv", Maldives */
Maldives: 0 (0%)
/* * id="ml", Mali */
Mali: 3 (0%)
/* * id="mt", Malta */
Malta: 0 (0%)
/* * id="mh", Marshall Islands */
Marshall Islands: 0 (0%)
/* * id="mr", Mauritania */
Mauritania: 0 (0%)
/* * id="mu", Mauritius */
Mauritius: 0 (0%)
/* * id="yt", Mayotte */
Mayotte: 0 (0%)
/* * id="mx", Mexico */
Mexico: 525 (17%)
/* * id="fm", F.S. Micronesia */
F.S. Micronesia: 0 (0%)
/* * id="md", Moldova */
Moldova: 0 (0%)
/* * id="mc", Monaco */
Monaco: 0 (0%)
/* * id="mn", Mongolia */
Mongolia: 0 (0%)
/* * id="me", Montenegro */
Montenegro: 0 (0%)
/* * id="ms", Montserrat (UK) */
Montserrat (UK): 0 (0%)
/* * id="ma", Morocco */
Morocco: 1 (0%)
/* * id="mz", Mozambique */
Mozambique: 0 (0%)
/* * id="mm", Myanmar */
Myanmar: 2 (0%)
/* * id="na", Namibia */
Namibia: 0 (0%)
/* * id="nr", Nauru */
Nauru: 0 (0%)
/* * id="np", Nepal */
Nepal: 0 (0%)
/* * id="nl", Netherlands */
Netherlands: 13 (0%)
/* * id="nc", New Caledonia (France) */
New Caledonia (France): 0 (0%)
/* * id="nz", New Zealand */
New Zealand: 168 (6%)
/* * id="ni", Nicaragua */
Nicaragua: 0 (0%)
/* * id="ne", Niger */
Niger: 0 (0%)
/* * id="ng", Nigeria */
Nigeria: 153 (39%)
/* * id="nu", Niue (NZ) */
Niue (NZ): 0 (0%)
/* * id="mk", North Macedonia */
North Macedonia: 0 (0%)
/* * id="mp", Northern Mariana Islands (US) */
Northern Mariana Islands (US): 0 (0%)
/* * id="no", Norway */
Norway: 0 (0%)
/* * id="om", Oman */
Oman: 0 (0%)
/* * id="pk", Pakistan */
Pakistan: 176 (21%)
/* * id="pw", Palau */
Palau: 0 (0%)
/* * id="ps", Palestine */
Palestine: 27 (0%)
/* * id="pa", Panama */
Panama: 0 (0%)
/* * id="pg", Papua New Guinea */
Papua New Guinea: 0 (0%)
/* * id="py", Paraguay */
Paraguay: 0 (0%)
/* * id="pe", Peru */
Peru: 16 (8%)
/* * id="ph", Philippines */
Philippines: 55 (0%)
/* * id="pn", Pitcairn Islands (UK) */
Pitcairn Islands (UK): 0 (0%)
/* * id="pl", Poland */
Poland: 394 (32%)
/* * id="pt", Portugal */
Portugal: 0 (0%)
/* * id="pr", Puerto Rico (US) */
Puerto Rico (US): 183 (60%)
/* * id="qa", Qatar */
Qatar: 2 (0%)
/* * id="ro", Romania */
Romania: 0 (0%)
/* * id="ru", Russia */
Russia: 15 (4%)
/* * id="rw", Rwanda */
Rwanda: 0 (0%)
/* * id="bl", Saint Barthelemy (France) */
Saint Barthelemy (France): 0 (0%)
/* * id="sh", Saint Helena, Ascension and Tristan da Cunha (UK) */
Saint Helena, Ascension and Tristan da Cunha (UK): 0 (0%)
/* * id="kn", Saint Kitts and Nevis */
Saint Kitts and Nevis: 0 (0%)
/* * id="lc", Saint Lucia */
Saint Lucia: 0 (0%)
/* * id="mf", Saint Martin (France) */
Saint Martin (France): 0 (0%)
/* * id="pm", Saint Pierre and Miquelon (France) */
Saint Pierre and Miquelon (France): 0 (0%)
/* * id="vc", Saint Vincent and the Grenadines */
Saint Vincent and the Grenadines: 0 (0%)
/* * id="ws", Samoa */
Samoa: 0 (0%)
/* * id="sm", San Marino */
San Marino: 0 (0%)
/* * id="st", Sao Tome and Principe */
Sao Tome and Principe: 0 (0%)
/* * id="sa", Saudi Arabia */
Saudi Arabia: 7 (0%)
/* * id="sn", Senegal */
Senegal: 0 (0%)
/* * id="rs", Serbia */
Serbia: 0 (0%)
/* * id="sc", Seychelles */
Seychelles: 34 (6%)
/* * id="sl", Sierra Leone */
Sierra Leone: 0 (0%)
/* * id="sg", Singapore */
Singapore: 0 (0%)
/* * id="sk", Slovakia */
Slovakia: 3,139 (32%)
/* * id="si", Slovenia */
Slovenia: 0 (0%)
/* * id="sb", Solomon Islands */
Solomon Islands: 0 (0%)
/* * id="so", Somalia */
Somalia: 10 (0%)
/* * id="za", South Africa */
South Africa: 4 (0%)
/* * id="ss", South Sudan */
South Sudan: 0 (0%)
/* * id="es", Spain */
Spain: 73 (6%)
/* * id="lk", Sri Lanka */
Sri Lanka: 0 (0%)
/* * id="sd", Sudan */
Sudan: 0 (0%)
/* * id="sr", Suriname */
Suriname: 0 (0%)
/* * id="se", Sweden */
Sweden: 0 (0%)
/* * id="ch", Switzerland */
Switzerland: 16,912 (19%)
/* * id="sy", Syria */
Syria: 0 (0%)
/* * id="tw", Taiwan */
Taiwan: 10 (0%)
/* * id="tj", Tajikistan */
Tajikistan: 0 (0%)
/* * id="tz", Tanzania */
Tanzania: 0 (0%)
/* * id="th", Thailand */
Thailand: 56 (5%)
/* * id="tl", East Timor */
East Timor: 0 (0%)
/* * id="tg", Togo */
Togo: 5 (0%)
/* * id="to", Tonga */
Tonga: 0 (0%)
/* * id="tt", Trinidad and Tobago */
Trinidad and Tobago: 0 (0%)
/* * id="tn", Tunisia */
Tunisia: 31 (11%)
/* * id="tr", Turkey */
Turkey: 1 (0%)
/* * id="tm", Turkmenistan */
Turkmenistan: 0 (0%)
/* * id="tc", Turks and Caicos Islands (UK) */
Turks and Caicos Islands (UK): 0 (0%)
/* * id="tv", Tuvalu */
Tuvalu: 0 (0%)
/* * id="ug", Uganda */
Uganda: 0 (0%)
/* * id="ua", Ukraine */
Ukraine: 0 (0%)
/* * id="ae", United Arab Emirates */
United Arab Emirates: 0 (0%)
/* * id="gb", United Kingdom */
United Kingdom: 211,733 (19%)
/* * id="us", United States */
United States: 213,134 (13%)
/* * id="uy", Uruguay */
Uruguay: 1 (0%)
/* * id="uz", Uzbekistan */
Uzbekistan: 7 (0%)
/* * id="vu", Vanuatu */
Vanuatu: 0 (0%)
/* * id="ve", Venezuela */
Venezuela: 17 (0%)
/* * id="vn", Vietnam */
Vietnam: 0 (0%)
/* * id="vg", British Virgin Islands (UK) */
British Virgin Islands (UK): 0 (0%)
/* * id="vi", U.S. Virgin Islands (US) */
U.S. Virgin Islands (US): 0 (0%)
/* * id="wf", Wallis and Futuna (France) */
Wallis and Futuna (France): 0 (0%)
/* * id="eh", Western Sahara */
Western Sahara: 0 (0%)
/* * id="ye", Yemen */
Yemen: 0 (0%)
/* * id="zm", Zambia */
Zambia: 0 (0%)
/* * id="zw", Zimbabwe */
Zimbabwe: 0 (0%)
Gray
: unsampled;
White
: <100 specimens;
Yellow
: <25%;
Orange
: <:50%;
Red
: <75%;
Maroon
: <100%;
Black
: 100%
The KAGIANA Project
(since 2006)
Copyright (C) 2017-2021 All rights reserved Ogata Lab. & Osaka Prefecture University